Trunk mount battery short protection
The positive cable does not need protection, but a disconnect switch is a good idea, even if your are not drag racing. It should be run directly to starter positive post. Make sure cable run is protected from heat sources, sharp edges, etc.
Power distribution for fuse panel can be from disconnect switch. This wire should be atleast 8 AWG with a fusible link. The fusible link is always 2 sizes smaller (12AWG) and should be 5-3/4" long.
Run a second wire from disconnect switch (same size) to a remote terminal block in engine compartment. The ouput of alternator will also go to this terminal block. Use at least an 8 AWG wire for this with a fusible link. This second run is your major load side, headlights, electric fan, pump, etc. All loads should have relays to handle that function. The fuse panel side is only for control function. Use a 3 wire alternator (one wire alternators were designed by GM for tractors only, as they run at one constant speed. They also require atleast 1600-1800 RPM initially to cause the field to self-excite. But when your RPM drops back to idle, the field can fall off and alternator output stops. The 2 small wires on side plug are as follows; one is for system voltage sensing and the other provides field from ignition. This wire you install a diode to prevent backfeeding when you turn off ignition. For MSD ignitions this is a must.
Hope this helps.
100 amp One Wire Alternator
To Don Shillady
Your alternator should have a plastic plug on the side, near the cooling blade. Remove it and install a plug available at any parts house to make it a 3-wire alternator. The importance of the field wire when ignition is on, is that your alternator will always have a field on it regardless of RPM. GM alternators power curve starts at about 2600 RPM. Your pulley ratio of crank to alternator needs to be 2-1/2 - 3 to one. This ensures enough RPM on alternator.
More info. available at "madelectrical.com"
Trunk mount battery protection
To Skids72 and DennyW
You need to run to separate systems (Load) & (Control). Reasons are for your fuse panel does not need the load, most aftermarkets are not sufficiently rated (Painless). Enos Components does make a 300A solid state mother board for his fuse panel. Second, drag race applications, tech will have you run engine, then open kill switch. On a system not separated, your voltage regulator will see volt drop when engine dies, this can cause a voltage spike and fry your MSD electronics box. TRUST ME! I have been wiring street rods, drag racing of all classes for 10 years. Larry Dixon Sr. (1970 Winter Nationals Winner) sends me his customers. I have been working in power plant for 32 years in operations as a senior control operator and shift supervisor (we make electricity).
Hope this helps. catsasswiring@yahoo.com